Collaborative Cross Graphical Genome:
Su, Hang, Ziwei Chen, Maya L. Najarian, Martin T. Ferris, Fernando Pardo-Manuel de Villena, and Leonard McMillan. "A k-mer query tool for assessing population diversity in pangenomes." Proceedings of the 12th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (BCB '21), pp. 1-9. 2021.
Other CC Genome Resources:
Shorter, J.R., Najarian, M.L., Bell, T.A., Blanchard, M., Ferris, M.T., Hock, P., Kashfeen, A., Kirchoff, K.E., Linnertz, C.L., Sigmon, J.S. and Miller, D.R., Whole genome sequencing and progress toward full inbreeding of the mouse collaborative cross population." G3: Genes, Genomes, Genetics, 9(5), pp.1303-1311, 2019.
Srivastava, A., Morgan, A.P., Najarian, M.L., Sarsani, V.K., Sigmon, J.S., Shorter, J.R., Kashfeen, A., McMullan, R.C., Williams, L.H., Giusti-Rodriguez, P. and Ferris, M.T., "Genomes of the mouse collaborative cross." Genetics, 206(2), pp.537-556, 2017.